STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tipATranscriptional activator TipA. (44 aa)    
Predicted Functional Partners:
ADO72389.1
Conserved uncharacterized protein.
  
     0.582
ADO71971.1
Uncharacterized protein.
  
     0.569
cmbC
Calmodulin-binding protein.
  
     0.554
ADO69996.1
Transcriptional regulator, MarR family.
  
   
 0.535
ADO72360.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.523
ADO75893.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.522
glnA
Glutamine synthetase.
 
 
 0.521
ADO72312.1
N-acetylmuramoyl-L-alanine amidase, family 2.
  
     0.516
ADO73332.1
Tetratricopeptide repeat domain protein.
  
 
 0.511
ADO67948.1
Lipase family protein.
  
     0.506
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.