Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO69467.1Conserved uncharacterized protein. (736 aa)    
Predicted Functional Partners:
barH
BarH protein.
 
     0.905
ADO69468.1
Uncharacterized protein.
       0.642
ADO76037.1
Conserved uncharacterized protein.
  
     0.642
ADO68414.1
Hydrolase.
  
     0.636
ADO72628.1
ABC transporter, ATP-binding protein.
  
  
 0.581
ADO73300.1
Conserved uncharacterized protein.
 
  
 0.575
ADO69171.1
Conserved uncharacterized protein.
 
  
 0.573
ADO71297.1
Abortive infection-like protein.
  
  
 0.553
ADO71511.1
CAAX amino terminal protease family protein.
  
  
 0.553
ADO72544.1
Uncharacterized protein.
  
  
 0.553
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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