Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO69810.1Tetratricopeptide TPR_2 repeat protein. (190 aa)    
Predicted Functional Partners:
ADO76112.1
Tetratricopeptide repeat domain protein.
  
 
   0.724
ADO71438.1
Tetratricopeptide repeat protein.
  
     0.720
ADO70067.1
Tetratricopeptide repeat domain protein.
  
     0.636
ADO73693.1
Tetratricopeptide repeat protein.
  
   0.635
ADO71141.1
Tetratricopeptide repeat protein.
  
 
   0.612
ADO70489.1
Tetratricopeptide repeat protein.
 
 
 0.593
ADO73455.1
Tetratricopeptide repeat protein.
  
     0.581
ADO72581.1
Tetratricopeptide repeat protein.
  
     0.563
ADO71636.1
TPR repeat protein.
  
     0.560
aglT
Adventurous gliding protein T.
  
     0.543
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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