STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO70289.1Nacht domain family. (1468 aa)    
Predicted Functional Partners:
ADO75630.1
WD-40 repeat protein.
 
     0.545
ADO69849.1
WD-40 repeat containing protein.
 
     0.448
ADO67825.1
Tetratricopeptide repeat family protein.
 
     0.420
ADO70290.1
Uncharacterized protein.
       0.415
ADO69323.1
Tetratricopeptide repeat family protein.
 
     0.409
ADO74252.1
WD40-repeat containing protein.
 
     0.406
ADO74432.1
Tetratricopeptide repeat family protein.
 
     0.405
ADO68616.1
Tetratricopeptide repeat family protein.
 
     0.400
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.