Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO70304.1Conserved uncharacterized protein. (224 aa)    
Predicted Functional Partners:
ADO70306.1
Phage late control gene D protein.
       0.780
ADO70307.1
Conserved uncharacterized protein.
       0.780
ADO70308.1
Conserved uncharacterized protein.
       0.780
ADO70303.1
Conserved uncharacterized protein.
       0.775
ADO70305.1
Conserved uncharacterized protein.
       0.773
ADO70309.1
Phage tail tape measure protein.
       0.752
ADO70310.1
Conserved uncharacterized protein.
       0.752
ADO70311.1
Conserved uncharacterized protein.
       0.752
ADO70312.1
Conserved uncharacterized protein.
       0.522
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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