STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppBOppB-like oligopeptide permease. (294 aa)    
Predicted Functional Partners:
oppC
OppC-like oligopeptide permease.
 
 
 0.998
ADO74963.1
ABC transporter, periplasmic substrate-binding protein.
 
 0.990
oppA
OppA-like oligopeptide permease.
 
  
 0.979
ADO73146.1
Peptide ABC transporter, permease protein.
 
  
 0.927
ADO73215.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.910
ADO73216.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.910
ADO73144.1
ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.909
ADO73145.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.909
ADO73148.1
ABC-type dipeptide transport system, periplasmic component.
 
 
 0.878
ADO73147.1
Peptide ABC transporter, permease protein.
  
     0.769
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.