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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO70995.1Sensor protein. (698 aa)    
Predicted Functional Partners:
ADO68973.1
Hybrid signal transduction histidine kinase J.
 
 
0.970
ADO68098.1
Putative response regulator/receiver.
 
 
0.916
ADO70811.1
Sensor protein.
 
 
0.915
ADO75311.1
Sensor protein.
 
 
0.911
ADO75714.1
Sensor protein.
 
 
0.911
ADO69684.1
Sensor protein.
 
 
0.904
ADO68218.1
Response regulator.
 
 
 0.900
ADO72503.1
Response regulator receiver protein.
 
 
 0.824
ADO75600.1
Response regulator.
 
 
 0.822
ADO75323.1
Sensor protein.
 
 
0.816
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.