Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO70995.1Sensor protein. (698 aa)    
Predicted Functional Partners:
ADO68973.1
Hybrid signal transduction histidine kinase J.
 
 
0.929
ADO68098.1
Putative response regulator/receiver.
 
 
0.883
ADO70811.1
Sensor protein.
 
 
0.883
ADO75311.1
Sensor protein.
 
 
0.879
ADO68218.1
Response regulator.
 
 
 0.878
ADO75714.1
Sensor protein.
 
 
0.876
ADO69684.1
Sensor protein.
 
 
0.860
ADO75323.1
Sensor protein.
 
 
0.822
ADO72503.1
Response regulator receiver protein.
 
 
 0.804
ADO75600.1
Response regulator.
 
 
 0.802
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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