STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO71054.1Tetratricopeptide repeat domain protein. (674 aa)    
Predicted Functional Partners:
ADO71053.1
Conserved uncharacterized protein.
 
     0.956
ADO71052.1
Conserved uncharacterized protein.
 
     0.955
ADO71057.1
Conserved uncharacterized protein.
 
     0.927
agmK
Adventurous gliding motility protein AgmK.
 
     0.790
ADO73419.1
Tetratricopeptide repeat protein.
 
     0.784
ADO71631.1
FHA/TonB domain protein.
 
     0.778
ADO73416.1
FHA domain/TonB domain protein.
 
     0.778
ADO74357.1
Conserved uncharacterized protein.
 
     0.775
gspK
General secretion pathway protein K.
  
     0.774
ADO70982.1
Prepilin-type N-terminal cleavage/methylation domain protein.
  
     0.774
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.