Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO71392.1Conserved uncharacterized protein. (346 aa)    
Predicted Functional Partners:
ADO71677.1
Hydrolase.
  
     0.585
ADO71014.1
Esterase.
  
     0.569
msrB-2
Peptide methionine sulfoxide reductase MsrB.
       0.554
ADO73887.1
Hydrolase, alpha/beta fold family.
  
     0.547
ADO69490.1
MtaE protein.
  
 0.527
ADO71393.1
Unsaturated glucuronyl hydrolase.
       0.522
ADO71639.1
Hydrolase, alpha/beta fold family.
  
     0.520
spiD
Polyketide synthase type I.
  
 0.519
ADO69261.1
Hydrolase, alpha/beta fold family.
  
     0.503
ADO68946.1
Polyketide synthase type I.
  
 0.480
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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