STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO71944.1Conserved uncharacterized protein. (709 aa)    
Predicted Functional Partners:
ADO73132.1
Uncharacterized protein.
  
     0.687
ADO73475.1
Plant virus icosahedral capsid family protein.
  
     0.662
ADO75654.1
Conserved uncharacterized protein.
  
     0.636
ADO74578.1
Uncharacterized protein.
  
     0.594
ADO69577.1
SUF system FeS assembly protein, NifU family.
   
    0.561
iscU
FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.561
lppF
Conserved lipoprotein LppF.
  
     0.535
ADO69156.1
Uncharacterized protein.
  
     0.474
ADO73152.1
Conserved uncharacterized protein.
  
     0.470
ADO69623.1
Uncharacterized protein.
  
     0.468
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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