STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO72225.1Conserved uncharacterized protein. (552 aa)    
Predicted Functional Partners:
ADO73202.1
Type II secretion system protein F domain protein.
 
    0.850
ADO73203.1
Type II secretion system protein F domain protein.
 
    0.842
ADO75278.1
Type II secretion system protein E.
 
     0.702
ADO72757.1
Type II secretion system protein E.
 
     0.701
ADO72226.1
acyl-CoA dehydrogenase.
       0.556
ADO74283.1
Conserved uncharacterized protein.
  
     0.550
ADO73204.1
Flp pilus assembly protein CpaB.
 
    0.546
ADO72758.1
Type II and III secretion system; Belongs to the bacterial secretin family.
 
     0.514
ADO74087.1
Type III secretion system apparatus protein YscQ/HrcQ.
  
    0.492
ADO74282.1
Conserved uncharacterized protein.
  
     0.489
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.