Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO72415.1TonB-dependent receptor. (904 aa)    
Predicted Functional Partners:
ADO72414.1
Conserved uncharacterized protein.
 
   
 0.939
ADO76071.1
TonB family protein.
 
 
 0.800
ADO74884.1
TonB family protein.
 
 
 0.782
ADO68647.1
TonB domain protein.
 
 
 0.692
mxcH
MxcH protein.
 
 
 0.562
ADO72450.1
Peptidase, M19 family.
  
     0.553
ADO75022.1
Conserved uncharacterized protein.
  
     0.550
ADO72416.1
Cysteine desulfurase family protein.
       0.518
tonB
Ferric siderophore transporter, periplasmic energy transduction protein TonB.
 
 
 0.512
ADO75796.1
TonB dependent receptor.
  
  
 0.511
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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