Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO72696.1Transposase. (401 aa)    
Predicted Functional Partners:
ADO73074.1
Helicase.
 
    0.634
ADO70915.1
Conserved uncharacterized protein.
  
     0.607
ADO70253.1
Beta-catenin-interacting ICAT family protein.
 
    0.600
ADO72697.1
Transposase, IS4-like protein.
 
     0.599
ADO70386.1
PBS lyase HEAT-like repeat protein.
  
     0.598
ADO68713.1
Virulence-associated protein E.
  
     0.586
ADO73923.1
Virulence-associated protein E family protein.
  
     0.582
ADO72747.1
Transposase.
  
     0.578
ADO75225.1
Transposase.
  
     0.576
ADO76084.1
Transposase.
  
     0.576
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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