STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO72758.1Type II and III secretion system; Belongs to the bacterial secretin family. (485 aa)    
Predicted Functional Partners:
ADO72757.1
Type II secretion system protein E.
  
 0.966
ADO73204.1
Flp pilus assembly protein CpaB.
 
  
 0.951
ADO75278.1
Type II secretion system protein E.
  
 0.912
ADO73202.1
Type II secretion system protein F domain protein.
 
  
 0.899
ADO73203.1
Type II secretion system protein F domain protein.
 
  
 0.886
ADO72759.1
Type IV leader peptidase family protein.
 
   
 0.871
ADO73649.1
Conserved uncharacterized protein.
 
  
 0.846
ADO76074.1
MotA/TolQ/ExbB proton channel family protein.
  
     0.637
ADO75002.1
MotA/TolQ/ExbB proton channel family protein.
  
     0.635
ADO73220.1
MotA/TolQ/ExbB proton channel family protein.
  
     0.628
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.