STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO72893.1ATPase, AAA family. (313 aa)    
Predicted Functional Partners:
ADO72110.1
Conserved uncharacterized protein.
 
   
 0.790
ADO75420.1
Conserved uncharacterized protein.
 
    0.626
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
    0.539
ADO73893.1
Glutathione-dependent formaldehyde-activating, GFA family protein.
  
    0.513
ADO72892.1
Conserved uncharacterized protein.
       0.497
ADO75967.1
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate.
  
    0.470
ADO72895.1
Conserved uncharacterized protein.
       0.425
alkK
Medium-chain fatty acid--CoA ligase.
 
    0.421
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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