STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO73101.1Lytic transglycosylase. (311 aa)    
Predicted Functional Partners:
ADO69223.1
Transglycosylase SLT domain protein.
  
     0.759
epaO
Type III secretion system apparatus protein YscQ/HrcQ.
  
  
 0.628
ADO74087.1
Type III secretion system apparatus protein YscQ/HrcQ.
  
  
 0.628
ADO70833.1
ATPase, FliI/YscN family.
 
  
 0.591
ADO73102.1
Alpha-1,2-mannosidase family protein.
       0.568
ADO72280.1
Transglycosylase.
 
   
 0.527
ADO70148.1
Uncharacterized protein.
  
  
 0.499
ADO69414.1
Conserved uncharacterized protein.
 
     0.471
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.