Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADO68973.1 | ADO72598.1 | STAUR_1169 | STAUR_4820 | Hybrid signal transduction histidine kinase J. | Sensor protein. | 0.979 |
ADO68973.1 | ADO73677.1 | STAUR_1169 | STAUR_5916 | Hybrid signal transduction histidine kinase J. | Sensor histidine kinase/response regulator. | 0.990 |
ADO68973.1 | ADO74087.1 | STAUR_1169 | STAUR_6330 | Hybrid signal transduction histidine kinase J. | Type III secretion system apparatus protein YscQ/HrcQ. | 0.969 |
ADO68973.1 | ADO74868.1 | STAUR_1169 | STAUR_7112 | Hybrid signal transduction histidine kinase J. | Sensor protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
ADO68973.1 | ADO75311.1 | STAUR_1169 | STAUR_7556 | Hybrid signal transduction histidine kinase J. | Sensor protein. | 0.987 |
ADO68973.1 | cheB2 | STAUR_1169 | STAUR_5915 | Hybrid signal transduction histidine kinase J. | Chemotaxis response regulator protein-glutamate methylesterase 2; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.808 |
ADO68973.1 | dhkJ | STAUR_1169 | STAUR_7575 | Hybrid signal transduction histidine kinase J. | Hybrid signal transduction histidine kinase J. | 0.990 |
ADO68973.1 | epaO | STAUR_1169 | STAUR_3044 | Hybrid signal transduction histidine kinase J. | Type III secretion system apparatus protein YscQ/HrcQ. | 0.969 |
ADO68973.1 | mcP1 | STAUR_1169 | STAUR_5918 | Hybrid signal transduction histidine kinase J. | Chemoreceptor McP1. | 0.634 |
ADO68973.1 | mcP2 | STAUR_1169 | STAUR_5917 | Hybrid signal transduction histidine kinase J. | Chemoreceptor McP2. | 0.634 |
ADO72598.1 | ADO68973.1 | STAUR_4820 | STAUR_1169 | Sensor protein. | Hybrid signal transduction histidine kinase J. | 0.979 |
ADO72598.1 | ADO73677.1 | STAUR_4820 | STAUR_5916 | Sensor protein. | Sensor histidine kinase/response regulator. | 0.962 |
ADO72598.1 | ADO74087.1 | STAUR_4820 | STAUR_6330 | Sensor protein. | Type III secretion system apparatus protein YscQ/HrcQ. | 0.976 |
ADO72598.1 | ADO74868.1 | STAUR_4820 | STAUR_7112 | Sensor protein. | Sensor protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.983 |
ADO72598.1 | ADO75311.1 | STAUR_4820 | STAUR_7556 | Sensor protein. | Sensor protein. | 0.975 |
ADO72598.1 | cheB2 | STAUR_4820 | STAUR_5915 | Sensor protein. | Chemotaxis response regulator protein-glutamate methylesterase 2; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.565 |
ADO72598.1 | dhkJ | STAUR_4820 | STAUR_7575 | Sensor protein. | Hybrid signal transduction histidine kinase J. | 0.968 |
ADO72598.1 | epaO | STAUR_4820 | STAUR_3044 | Sensor protein. | Type III secretion system apparatus protein YscQ/HrcQ. | 0.967 |
ADO73677.1 | ADO68973.1 | STAUR_5916 | STAUR_1169 | Sensor histidine kinase/response regulator. | Hybrid signal transduction histidine kinase J. | 0.990 |
ADO73677.1 | ADO72598.1 | STAUR_5916 | STAUR_4820 | Sensor histidine kinase/response regulator. | Sensor protein. | 0.962 |
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