Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADO69490.1 | ADO72899.1 | STAUR_1686 | STAUR_5127 | MtaE protein. | Cysteine desulfurase. | 0.430 |
ADO69490.1 | ADO74079.1 | STAUR_1686 | STAUR_6322 | MtaE protein. | Ribonuclease BN. | 0.479 |
ADO69490.1 | iscS | STAUR_1686 | STAUR_5813 | MtaE protein. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.430 |
ADO69577.1 | ADO72899.1 | STAUR_1773 | STAUR_5127 | SUF system FeS assembly protein, NifU family. | Cysteine desulfurase. | 0.905 |
ADO69577.1 | ADO74079.1 | STAUR_1773 | STAUR_6322 | SUF system FeS assembly protein, NifU family. | Ribonuclease BN. | 0.597 |
ADO69577.1 | ADO74453.1 | STAUR_1773 | STAUR_6696 | SUF system FeS assembly protein, NifU family. | NIF system FeS cluster assembly, NifU family protein. | 0.698 |
ADO69577.1 | hscB | STAUR_1773 | STAUR_5816 | SUF system FeS assembly protein, NifU family. | Fe-S protein assembly co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.940 |
ADO69577.1 | iscS | STAUR_1773 | STAUR_5813 | SUF system FeS assembly protein, NifU family. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.917 |
ADO72899.1 | ADO69490.1 | STAUR_5127 | STAUR_1686 | Cysteine desulfurase. | MtaE protein. | 0.430 |
ADO72899.1 | ADO69577.1 | STAUR_5127 | STAUR_1773 | Cysteine desulfurase. | SUF system FeS assembly protein, NifU family. | 0.905 |
ADO72899.1 | ADO74079.1 | STAUR_5127 | STAUR_6322 | Cysteine desulfurase. | Ribonuclease BN. | 0.655 |
ADO72899.1 | ADO74453.1 | STAUR_5127 | STAUR_6696 | Cysteine desulfurase. | NIF system FeS cluster assembly, NifU family protein. | 0.720 |
ADO72899.1 | hscB | STAUR_5127 | STAUR_5816 | Cysteine desulfurase. | Fe-S protein assembly co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.804 |
ADO72899.1 | iscS | STAUR_5127 | STAUR_5813 | Cysteine desulfurase. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.914 |
ADO72899.1 | iscU | STAUR_5127 | STAUR_5814 | Cysteine desulfurase. | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.981 |
ADO73105.1 | ADO74079.1 | STAUR_5334 | STAUR_6322 | ArsC family protein; Belongs to the ArsC family. | Ribonuclease BN. | 0.532 |
ADO74078.1 | ADO74079.1 | STAUR_6321 | STAUR_6322 | Ribonuclease, Rne/Rng family. | Ribonuclease BN. | 0.559 |
ADO74078.1 | ihfB | STAUR_6321 | STAUR_6323 | Ribonuclease, Rne/Rng family. | Integration host factor, beta subunit; Belongs to the bacterial histone-like protein family. | 0.482 |
ADO74079.1 | ADO69490.1 | STAUR_6322 | STAUR_1686 | Ribonuclease BN. | MtaE protein. | 0.479 |
ADO74079.1 | ADO69577.1 | STAUR_6322 | STAUR_1773 | Ribonuclease BN. | SUF system FeS assembly protein, NifU family. | 0.597 |
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