Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADO68293.1 | ADO68675.1 | STAUR_0489 | STAUR_0871 | Response regulator receiver, CheW-like protein. | CheA signal transduction histidine kinase. | 0.787 |
ADO68293.1 | ADO73677.1 | STAUR_0489 | STAUR_5916 | Response regulator receiver, CheW-like protein. | Sensor histidine kinase/response regulator. | 0.791 |
ADO68293.1 | ADO74461.1 | STAUR_0489 | STAUR_6704 | Response regulator receiver, CheW-like protein. | Methyl-accepting chemotaxis protein. | 0.922 |
ADO68293.1 | ADO74463.1 | STAUR_0489 | STAUR_6706 | Response regulator receiver, CheW-like protein. | Chemotaxis sensor histidine kinase/response regulator. | 0.793 |
ADO68293.1 | ADO74465.1 | STAUR_0489 | STAUR_6708 | Response regulator receiver, CheW-like protein. | Chemotaxis protein methyltransferase CheR. | 0.820 |
ADO68293.1 | cheA | STAUR_0489 | STAUR_0860 | Response regulator receiver, CheW-like protein. | Chemotaxis protein, CheA. | 0.528 |
ADO68293.1 | cheA4 | STAUR_0489 | STAUR_3423 | Response regulator receiver, CheW-like protein. | Sensor histidine kinase/response regulator CheA4. | 0.758 |
ADO68293.1 | cheB-6 | STAUR_0489 | STAUR_6705 | Response regulator receiver, CheW-like protein. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.928 |
ADO68293.1 | difE | STAUR_0489 | STAUR_1221 | Response regulator receiver, CheW-like protein. | DifE-like protein. | 0.522 |
ADO68293.1 | frzE | STAUR_0489 | STAUR_4587 | Response regulator receiver, CheW-like protein. | Gliding motility regulatory protein. | 0.644 |
ADO68675.1 | ADO68293.1 | STAUR_0871 | STAUR_0489 | CheA signal transduction histidine kinase. | Response regulator receiver, CheW-like protein. | 0.787 |
ADO68675.1 | ADO73677.1 | STAUR_0871 | STAUR_5916 | CheA signal transduction histidine kinase. | Sensor histidine kinase/response regulator. | 0.787 |
ADO68675.1 | ADO74461.1 | STAUR_0871 | STAUR_6704 | CheA signal transduction histidine kinase. | Methyl-accepting chemotaxis protein. | 0.922 |
ADO68675.1 | ADO74463.1 | STAUR_0871 | STAUR_6706 | CheA signal transduction histidine kinase. | Chemotaxis sensor histidine kinase/response regulator. | 0.789 |
ADO68675.1 | ADO74465.1 | STAUR_0871 | STAUR_6708 | CheA signal transduction histidine kinase. | Chemotaxis protein methyltransferase CheR. | 0.856 |
ADO68675.1 | cheA | STAUR_0871 | STAUR_0860 | CheA signal transduction histidine kinase. | Chemotaxis protein, CheA. | 0.523 |
ADO68675.1 | cheA4 | STAUR_0871 | STAUR_3423 | CheA signal transduction histidine kinase. | Sensor histidine kinase/response regulator CheA4. | 0.741 |
ADO68675.1 | cheB-6 | STAUR_0871 | STAUR_6705 | CheA signal transduction histidine kinase. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.975 |
ADO68675.1 | difE | STAUR_0871 | STAUR_1221 | CheA signal transduction histidine kinase. | DifE-like protein. | 0.518 |
ADO68675.1 | frzE | STAUR_0871 | STAUR_4587 | CheA signal transduction histidine kinase. | Gliding motility regulatory protein. | 0.630 |
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