STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO74565.1Twitching mobility protein. (378 aa)    
Predicted Functional Partners:
pilC
Type IV pilin.
 
  
 0.850
pilD
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.825
gspF
General secretion pathway protein F.
 
  
 0.798
pilM
PilM protein (type IV pilus biogenesis protein).
 
   
 0.742
gspE
General secretion protein E.
 
  
 0.734
ADO72145.1
General secretory system II protein E.
  
 0.688
ADO73218.1
General secretion pathway protein E, N-terminal domain protein.
 
  
 0.687
ADO74680.1
Fimbrial protein.
 
   
 0.651
ADO74150.1
General secretory system II, protein E.
 
  
 0.622
ADO73217.1
General secretion pathway protein E, N-terminal domain protein.
 
  
 0.608
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.