STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO74824.12-oxoglutarate-Fe(II) oxygenase family enzyme. (235 aa)    
Predicted Functional Partners:
ADO74823.1
Conserved uncharacterized protein.
       0.764
ADO71222.1
Uncharacterized protein.
  
     0.750
ADO72730.1
Uncharacterized protein.
  
     0.745
ADO71221.1
Uncharacterized protein.
  
     0.731
mxcF
MxcF protein.
   
    0.730
ADO68829.1
Sodium ABC transporter, permease protein.
  
     0.619
ADO67927.1
Amidohydrolase.
  
     0.604
ADO73642.1
Major facilitator superfamily protein.
  
     0.596
ADO72095.1
Conserved uncharacterized protein.
  
     0.580
ADO75803.1
Amidohydrolase family protein.
  
     0.547
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.