STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO75006.1Conserved uncharacterized protein. (297 aa)    
Predicted Functional Partners:
ADO72953.1
O-antigen polymerase family protein.
  
     0.534
ADO74165.1
Conserved uncharacterized protein.
  
     0.532
ADO75005.1
Transcriptional regulator, MarR family.
       0.514
ADO68793.1
Pectin lyase.
  
    0.505
ADO69758.1
Tetratricopeptide repeat protein.
  
     0.500
mtsB
MtsB protein involved in cell-cell cohesion.
  
     0.493
mtsD
MtsD protein involved in cell-cell cohesion.
  
     0.475
ADO75503.1
RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.474
ADO69199.1
Outer membrane protein, OMP85 family.
  
     0.468
ADO69761.1
FHA domain protein.
  
     0.445
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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