STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO75112.1ErfK/YbiS/YcfS/YnhG family protein. (489 aa)    
Predicted Functional Partners:
ADO71354.1
Conserved uncharacterized protein.
  
     0.558
dacB
D-alanyl-D-alanine carboxypeptidase/ D-alanyl-D-alanine-endopeptidase.
     
 0.546
ADO72690.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
     
 0.546
ADO69759.1
Conserved uncharacterized protein.
  
     0.538
ADO71173.1
Penicillin-binding protein 2.
     
 0.528
ADO74487.1
Penicillin-binding protein 2.
     
 0.528
ADO74165.1
Conserved uncharacterized protein.
  
     0.518
ADO69758.1
Tetratricopeptide repeat protein.
  
     0.508
ADO72063.1
Conserved uncharacterized protein.
  
     0.506
ADO72953.1
O-antigen polymerase family protein.
  
    0.504
Your Current Organism:
Stigmatella aurantiaca
NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1
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