Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADO71571.1 | ADO72329.1 | STAUR_3783 | STAUR_4549 | Conserved uncharacterized protein. | Translation elongation factor. | 0.537 |
ADO71571.1 | ADO75134.1 | STAUR_3783 | STAUR_7378 | Conserved uncharacterized protein. | Dead/deah box helicase domain protein. | 0.520 |
ADO71571.1 | ADO75968.1 | STAUR_3783 | STAUR_8213 | Conserved uncharacterized protein. | Uncharacterized protein. | 0.520 |
ADO71571.1 | fusA | STAUR_3783 | STAUR_2990 | Conserved uncharacterized protein. | Elongation factor G 1; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.537 |
ADO71571.1 | fusA-2 | STAUR_3783 | STAUR_3735 | Conserved uncharacterized protein. | Elongation factor G 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.537 |
ADO72329.1 | ADO71571.1 | STAUR_4549 | STAUR_3783 | Translation elongation factor. | Conserved uncharacterized protein. | 0.537 |
ADO72329.1 | ADO73113.1 | STAUR_4549 | STAUR_5342 | Translation elongation factor. | Uncharacterized protein. | 0.537 |
ADO72329.1 | ADO74444.1 | STAUR_4549 | STAUR_6687 | Translation elongation factor. | Helicase, DEAD/DEAH family. | 0.426 |
ADO72329.1 | ADO75134.1 | STAUR_4549 | STAUR_7378 | Translation elongation factor. | Dead/deah box helicase domain protein. | 0.581 |
ADO72329.1 | ADO75968.1 | STAUR_4549 | STAUR_8213 | Translation elongation factor. | Uncharacterized protein. | 0.581 |
ADO72329.1 | hrpB | STAUR_4549 | STAUR_5034 | Translation elongation factor. | ATP-dependent helicase HrpB. | 0.426 |
ADO73113.1 | ADO72329.1 | STAUR_5342 | STAUR_4549 | Uncharacterized protein. | Translation elongation factor. | 0.537 |
ADO73113.1 | ADO75134.1 | STAUR_5342 | STAUR_7378 | Uncharacterized protein. | Dead/deah box helicase domain protein. | 0.520 |
ADO73113.1 | ADO75968.1 | STAUR_5342 | STAUR_8213 | Uncharacterized protein. | Uncharacterized protein. | 0.520 |
ADO73113.1 | fusA | STAUR_5342 | STAUR_2990 | Uncharacterized protein. | Elongation factor G 1; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.537 |
ADO73113.1 | fusA-2 | STAUR_5342 | STAUR_3735 | Uncharacterized protein. | Elongation factor G 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.537 |
ADO74444.1 | ADO72329.1 | STAUR_6687 | STAUR_4549 | Helicase, DEAD/DEAH family. | Translation elongation factor. | 0.426 |
ADO74444.1 | ADO75134.1 | STAUR_6687 | STAUR_7378 | Helicase, DEAD/DEAH family. | Dead/deah box helicase domain protein. | 0.550 |
ADO74444.1 | ADO75968.1 | STAUR_6687 | STAUR_8213 | Helicase, DEAD/DEAH family. | Uncharacterized protein. | 0.550 |
ADO74444.1 | fusA | STAUR_6687 | STAUR_2990 | Helicase, DEAD/DEAH family. | Elongation factor G 1; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.426 |
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