STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_0109Hypothetical protein. (547 aa)    
Predicted Functional Partners:
GAU_2866
Putative two-component hybrid sensor and regulator.
  
 
 0.849
GAU_1860
Two-component hybrid sensor and regulator.
  
 
 0.838
GAU_2543
Putative two-component histidine kinase.
 
 
 0.834
GAU_1340
Two-component hybrid sensor and regulator.
 
 
 0.771
GAU_3088
Putative two-component hybrid sensor and regulator.
 
 
 0.765
GAU_2109
Putative two-component histidine kinase.
 
 
 0.624
GAU_3592
Putative two-component hybrid sensor and regulator.
 
 
 0.572
GAU_1000
Putative two-component hybrid sensor and regulator.
  
 
 0.564
GAU_3052
Putative two-component hybrid sensor and regulator.
 
 
 0.562
GAU_0767
Putative two-component hybrid sensor and regulator.
 
 
 0.557
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.