Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU_0546 | GAU_0547 | GAU_0546 | GAU_0547 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.487 |
GAU_0546 | GAU_0548 | GAU_0546 | GAU_0548 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.487 |
GAU_0547 | GAU_0546 | GAU_0547 | GAU_0546 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.487 |
GAU_0547 | GAU_0548 | GAU_0547 | GAU_0548 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.773 |
GAU_0547 | GAU_0549 | GAU_0547 | GAU_0549 | Hypothetical membrane protein. | Hypothetical protein. | 0.560 |
GAU_0547 | GAU_1396 | GAU_0547 | GAU_1396 | Hypothetical membrane protein. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.672 |
GAU_0547 | divIVA | GAU_0547 | GAU_1397 | Hypothetical membrane protein. | Protein synonym: cell division initiation protein DivIVA. | 0.466 |
GAU_0547 | ftsA | GAU_0547 | GAU_1431 | Hypothetical membrane protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.494 |
GAU_0547 | ftsZ | GAU_0547 | GAU_1439 | Hypothetical membrane protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.750 |
GAU_0547 | gatB | GAU_0547 | GAU_1548 | Hypothetical membrane protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.682 |
GAU_0547 | hisS | GAU_0547 | GAU_1754 | Hypothetical membrane protein. | histidyl-tRNA synthetase; Protein synonym: HisRS; protein synonym: histidine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.408 |
GAU_0547 | mraW | GAU_0547 | GAU_1420 | Hypothetical membrane protein. | Putative S-adenosyl-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.411 |
GAU_0548 | GAU_0546 | GAU_0548 | GAU_0546 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.487 |
GAU_0548 | GAU_0547 | GAU_0548 | GAU_0547 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.773 |
GAU_0548 | GAU_0549 | GAU_0548 | GAU_0549 | Hypothetical membrane protein. | Hypothetical protein. | 0.560 |
GAU_0549 | GAU_0547 | GAU_0549 | GAU_0547 | Hypothetical protein. | Hypothetical membrane protein. | 0.560 |
GAU_0549 | GAU_0548 | GAU_0549 | GAU_0548 | Hypothetical protein. | Hypothetical membrane protein. | 0.560 |
GAU_1396 | GAU_0547 | GAU_1396 | GAU_0547 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Hypothetical membrane protein. | 0.672 |
GAU_1396 | divIVA | GAU_1396 | GAU_1397 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Protein synonym: cell division initiation protein DivIVA. | 0.980 |
GAU_1396 | ftsA | GAU_1396 | GAU_1431 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.465 |
page 1 of 3