Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU_0560 | GAU_0561 | GAU_0560 | GAU_0561 | Hypothetical membrane protein. | Hypothetical protein. | 0.992 |
GAU_0560 | GAU_0562 | GAU_0560 | GAU_0562 | Hypothetical membrane protein. | Putative glycosyltransferase. | 0.848 |
GAU_0560 | GAU_0563 | GAU_0560 | GAU_0563 | Hypothetical membrane protein. | Putative glycosyltransferase. | 0.686 |
GAU_0560 | GAU_0565 | GAU_0560 | GAU_0565 | Hypothetical membrane protein. | O-antigen polymerase family protein. | 0.641 |
GAU_0560 | GAU_0579 | GAU_0560 | GAU_0579 | Hypothetical membrane protein. | Putative exopolysaccharide biosynthesis protein. | 0.505 |
GAU_0560 | GAU_0609 | GAU_0560 | GAU_0609 | Hypothetical membrane protein. | Hypothetical protein. | 0.485 |
GAU_0560 | GAU_2744 | GAU_0560 | GAU_2744 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.647 |
GAU_0560 | GAU_3815 | GAU_0560 | GAU_3815 | Hypothetical membrane protein. | Hypothetical protein. | 0.554 |
GAU_0560 | asnB | GAU_0560 | GAU_0557 | Hypothetical membrane protein. | Asparagine synthetase. | 0.494 |
GAU_0560 | atpE | GAU_0560 | GAU_2489 | Hypothetical membrane protein. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.993 |
GAU_0561 | GAU_0560 | GAU_0561 | GAU_0560 | Hypothetical protein. | Hypothetical membrane protein. | 0.992 |
GAU_0561 | GAU_0562 | GAU_0561 | GAU_0562 | Hypothetical protein. | Putative glycosyltransferase. | 0.760 |
GAU_0561 | GAU_0563 | GAU_0561 | GAU_0563 | Hypothetical protein. | Putative glycosyltransferase. | 0.686 |
GAU_0561 | GAU_0565 | GAU_0561 | GAU_0565 | Hypothetical protein. | O-antigen polymerase family protein. | 0.428 |
GAU_0561 | GAU_0579 | GAU_0561 | GAU_0579 | Hypothetical protein. | Putative exopolysaccharide biosynthesis protein. | 0.402 |
GAU_0561 | GAU_0609 | GAU_0561 | GAU_0609 | Hypothetical protein. | Hypothetical protein. | 0.437 |
GAU_0561 | GAU_2744 | GAU_0561 | GAU_2744 | Hypothetical protein. | Hypothetical membrane protein. | 0.619 |
GAU_0561 | atpE | GAU_0561 | GAU_2489 | Hypothetical protein. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.993 |
GAU_0562 | GAU_0560 | GAU_0562 | GAU_0560 | Putative glycosyltransferase. | Hypothetical membrane protein. | 0.848 |
GAU_0562 | GAU_0561 | GAU_0562 | GAU_0561 | Putative glycosyltransferase. | Hypothetical protein. | 0.760 |
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