STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_0585Putative glycosyltransferase. (260 aa)    
Predicted Functional Partners:
GAU_0579
Putative exopolysaccharide biosynthesis protein.
 
  
 0.971
GAU_0580
Hypothetical protein.
  
  
 0.844
GAU_0570
Putative polysaccharide biosynthesis protein.
 
  
 0.791
GAU_1969
Putative GDP-6-deoxy-D-lyxo-4-hexulose reductase.
 
  
 0.786
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.723
GAU_0565
O-antigen polymerase family protein.
  
  
 0.692
GAU_0566
Putative glycosyltransferase.
 
  
 0.687
GAU_0553
Hypothetical protein.
 
  
 0.634
GAU_0341
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.631
GAU_0563
Putative glycosyltransferase.
 
  
 0.631
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.