Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU_0725 | GAU_0726 | GAU_0725 | GAU_0726 | Putative glycosyltransferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Putative oxidoreductase. | 0.673 |
GAU_0725 | GAU_0727 | GAU_0725 | GAU_0727 | Putative glycosyltransferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Hypothetical membrane protein. | 0.455 |
GAU_0725 | GAU_0728 | GAU_0725 | GAU_0728 | Putative glycosyltransferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Hypothetical protein. | 0.459 |
GAU_0726 | GAU_0725 | GAU_0726 | GAU_0725 | Putative oxidoreductase. | Putative glycosyltransferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.673 |
GAU_0726 | GAU_0727 | GAU_0726 | GAU_0727 | Putative oxidoreductase. | Hypothetical membrane protein. | 0.522 |
GAU_0726 | GAU_0728 | GAU_0726 | GAU_0728 | Putative oxidoreductase. | Hypothetical protein. | 0.517 |
GAU_0726 | GAU_0729 | GAU_0726 | GAU_0729 | Putative oxidoreductase. | Hypothetical protein. | 0.439 |
GAU_0726 | GAU_1350 | GAU_0726 | GAU_1350 | Putative oxidoreductase. | Hypothetical protein. | 0.775 |
GAU_0726 | GAU_2602 | GAU_0726 | GAU_2602 | Putative oxidoreductase. | Putative oxidoreductase. | 0.699 |
GAU_0726 | GAU_3579 | GAU_0726 | GAU_3579 | Putative oxidoreductase. | Thiol--disulfide interchange protein. | 0.585 |
GAU_0726 | polA | GAU_0726 | GAU_0010 | Putative oxidoreductase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.461 |
GAU_0727 | GAU_0725 | GAU_0727 | GAU_0725 | Hypothetical membrane protein. | Putative glycosyltransferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.455 |
GAU_0727 | GAU_0726 | GAU_0727 | GAU_0726 | Hypothetical membrane protein. | Putative oxidoreductase. | 0.522 |
GAU_0727 | GAU_0728 | GAU_0727 | GAU_0728 | Hypothetical membrane protein. | Hypothetical protein. | 0.848 |
GAU_0727 | GAU_0729 | GAU_0727 | GAU_0729 | Hypothetical membrane protein. | Hypothetical protein. | 0.932 |
GAU_0728 | GAU_0725 | GAU_0728 | GAU_0725 | Hypothetical protein. | Putative glycosyltransferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.459 |
GAU_0728 | GAU_0726 | GAU_0728 | GAU_0726 | Hypothetical protein. | Putative oxidoreductase. | 0.517 |
GAU_0728 | GAU_0727 | GAU_0728 | GAU_0727 | Hypothetical protein. | Hypothetical membrane protein. | 0.848 |
GAU_0728 | GAU_0729 | GAU_0728 | GAU_0729 | Hypothetical protein. | Hypothetical protein. | 0.742 |
GAU_0729 | GAU_0726 | GAU_0729 | GAU_0726 | Hypothetical protein. | Putative oxidoreductase. | 0.439 |
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