Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU_0732 | GAU_0733 | GAU_0732 | GAU_0733 | Hypothetical protein. | Hypothetical protein. | 0.762 |
GAU_0732 | GAU_0735 | GAU_0732 | GAU_0735 | Hypothetical protein. | Hypothetical protein. | 0.449 |
GAU_0732 | accA | GAU_0732 | GAU_0736 | Hypothetical protein. | acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.400 |
GAU_0732 | metG | GAU_0732 | GAU_0734 | Hypothetical protein. | methionyl-tRNA synthetase; Protein synonym: MetRS; protein synonym: methionine--tRNA ligase. | 0.449 |
GAU_0733 | GAU_0732 | GAU_0733 | GAU_0732 | Hypothetical protein. | Hypothetical protein. | 0.762 |
GAU_0733 | GAU_0735 | GAU_0733 | GAU_0735 | Hypothetical protein. | Hypothetical protein. | 0.454 |
GAU_0733 | accA | GAU_0733 | GAU_0736 | Hypothetical protein. | acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.405 |
GAU_0733 | dnaE | GAU_0733 | GAU_0737 | Hypothetical protein. | DNA polymerase III alpha subunit. | 0.407 |
GAU_0733 | metG | GAU_0733 | GAU_0734 | Hypothetical protein. | methionyl-tRNA synthetase; Protein synonym: MetRS; protein synonym: methionine--tRNA ligase. | 0.455 |
GAU_0735 | GAU_0732 | GAU_0735 | GAU_0732 | Hypothetical protein. | Hypothetical protein. | 0.449 |
GAU_0735 | GAU_0733 | GAU_0735 | GAU_0733 | Hypothetical protein. | Hypothetical protein. | 0.454 |
GAU_0735 | GAU_0738 | GAU_0735 | GAU_0738 | Hypothetical protein. | Hypothetical protein. | 0.448 |
GAU_0735 | accA | GAU_0735 | GAU_0736 | Hypothetical protein. | acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.689 |
GAU_0735 | dnaE | GAU_0735 | GAU_0737 | Hypothetical protein. | DNA polymerase III alpha subunit. | 0.597 |
GAU_0735 | metG | GAU_0735 | GAU_0734 | Hypothetical protein. | methionyl-tRNA synthetase; Protein synonym: MetRS; protein synonym: methionine--tRNA ligase. | 0.918 |
GAU_0735 | recR | GAU_0735 | GAU_1114 | Hypothetical protein. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.575 |
GAU_0735 | rny | GAU_0735 | GAU_1871 | Hypothetical protein. | Hypothetical protein; Endoribonuclease that initiates mRNA decay. | 0.780 |
GAU_0735 | rsmI | GAU_0735 | GAU_1251 | Hypothetical protein. | Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.450 |
GAU_0735 | tmk | GAU_0735 | GAU_1187 | Hypothetical protein. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.522 |
GAU_0738 | GAU_0735 | GAU_0738 | GAU_0735 | Hypothetical protein. | Hypothetical protein. | 0.448 |
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