STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_0788Purine phosphoribosyltransferase. (179 aa)    
Predicted Functional Partners:
GAU_2764
Hypothetical protein.
  
    0.713
GAU_2042
Hypothetical protein.
  
     0.655
parA-2
Chromosome partitioning protein ParA.
 
     0.616
GAU_0775
Exonuclease.
  
     0.564
GAU_0787
Hypothetical protein.
       0.543
GAU_0743
Hypothetical protein.
  
     0.542
GAU_0777
Hypothetical protein.
  
     0.527
GAU_2470
Putative outer membrane protein.
  
     0.510
GAU_2169
Hypothetical protein.
  
     0.493
GAU_2486
Hypothetical protein.
  
     0.489
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.