Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU_0229 | GAU_0536 | GAU_0229 | GAU_0536 | Protein synonym: O6-methylguanine-DNA methyltransferase. | DNA polymerase X family protein. | 0.408 |
GAU_0229 | GAU_0824 | GAU_0229 | GAU_0824 | Protein synonym: O6-methylguanine-DNA methyltransferase. | Putative adenine glycosylase. | 0.446 |
GAU_0229 | exoA | GAU_0229 | GAU_3349 | Protein synonym: O6-methylguanine-DNA methyltransferase. | Exodeoxyribonuclease III. | 0.484 |
GAU_0229 | polA | GAU_0229 | GAU_0010 | Protein synonym: O6-methylguanine-DNA methyltransferase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.655 |
GAU_0536 | GAU_0229 | GAU_0536 | GAU_0229 | DNA polymerase X family protein. | Protein synonym: O6-methylguanine-DNA methyltransferase. | 0.408 |
GAU_0536 | GAU_0824 | GAU_0536 | GAU_0824 | DNA polymerase X family protein. | Putative adenine glycosylase. | 0.437 |
GAU_0536 | dnaN | GAU_0536 | GAU_0002 | DNA polymerase X family protein. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.812 |
GAU_0536 | exoA | GAU_0536 | GAU_3349 | DNA polymerase X family protein. | Exodeoxyribonuclease III. | 0.762 |
GAU_0536 | polA | GAU_0536 | GAU_0010 | DNA polymerase X family protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.902 |
GAU_0824 | GAU_0229 | GAU_0824 | GAU_0229 | Putative adenine glycosylase. | Protein synonym: O6-methylguanine-DNA methyltransferase. | 0.446 |
GAU_0824 | GAU_0536 | GAU_0824 | GAU_0536 | Putative adenine glycosylase. | DNA polymerase X family protein. | 0.437 |
GAU_0824 | GAU_0825 | GAU_0824 | GAU_0825 | Putative adenine glycosylase. | Hypothetical protein. | 0.468 |
GAU_0824 | GAU_0826 | GAU_0824 | GAU_0826 | Putative adenine glycosylase. | Putative ABC transporter ATP-binding protein. | 0.468 |
GAU_0824 | GAU_0827 | GAU_0824 | GAU_0827 | Putative adenine glycosylase. | Putative divalent ion tolerance protein. | 0.435 |
GAU_0824 | GAU_2196 | GAU_0824 | GAU_2196 | Putative adenine glycosylase. | Hypothetical membrane protein. | 0.675 |
GAU_0824 | dnaN | GAU_0824 | GAU_0002 | Putative adenine glycosylase. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.447 |
GAU_0824 | exoA | GAU_0824 | GAU_3349 | Putative adenine glycosylase. | Exodeoxyribonuclease III. | 0.803 |
GAU_0824 | hemZ | GAU_0824 | GAU_1900 | Putative adenine glycosylase. | Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.568 |
GAU_0824 | polA | GAU_0824 | GAU_0010 | Putative adenine glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.449 |
GAU_0825 | GAU_0824 | GAU_0825 | GAU_0824 | Hypothetical protein. | Putative adenine glycosylase. | 0.468 |
page 1 of 3