STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_0923Putative serine/threonine protein kinase. (309 aa)    
Predicted Functional Partners:
GAU_2173
Putative serine/threonine protein phosphatase.
 
   0.888
GAU_3833
Putative phosphoprotein phosphatase.
 
   0.874
GAU_3815
Hypothetical protein.
 
      0.872
GAU_0938
Putative serine/threonine protein phosphatase.
 
   0.822
GAU_3005
Putative serine/threonine protein phosphatase.
  
   0.821
GAU_0389
Putative two-component histidine kinase.
 
  
   0.768
GAU_1860
Two-component hybrid sensor and regulator.
 
  
 
 0.689
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.637
GAU_0924
Putative dipeptide epimerase.
       0.634
GAU_0926
Putative aminotransferase.
       0.559
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.