STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_1105Hypothetical protein. (267 aa)    
Predicted Functional Partners:
lipB
Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
 
    
 0.912
pgi
Glucose-6-phosphate isomerase; Protein synonym: GPI; protein synonym: PGI; protein synonym: PHI; protein synonym: phosphoglucose isomerase; protein synonym: phosphohexose isomerase; Belongs to the GPI family.
  
    0.781
pykA
Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.707
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 
     0.545
ribF
Riboflavin kinase/FMN adenylyltransferase; Bifunctional protein; protein synonym: FAD pyrophosphorylase; protein synonym: FAD synthetase; protein synonym: flavokinase; protein synonym: riboflavin biosynthesis protein RibF; Belongs to the ribF family.
      0.520
GAU_1000
Putative two-component hybrid sensor and regulator.
  
  
 0.506
GAU_1107
Putative fructose-bisphosphate aldolase; Protein synonym: fructose-1,6-bisphosphate triosephosphate-lyase; protein synonym: ketose 1-phosphate aldolase.
       0.489
GAU_1110
Threonine aldolase.
 
     0.413
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.