Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU_0940 | GAU_1254 | GAU_0940 | GAU_1254 | Hypothetical protein. | Hypothetical protein. | 0.402 |
GAU_1252 | GAU_1253 | GAU_1252 | GAU_1253 | Hypothetical protein. | Hypothetical membrane protein. | 0.910 |
GAU_1252 | GAU_1254 | GAU_1252 | GAU_1254 | Hypothetical protein. | Hypothetical protein. | 0.671 |
GAU_1252 | GAU_1255 | GAU_1252 | GAU_1255 | Hypothetical protein. | Hypothetical protein. | 0.923 |
GAU_1252 | rsmI | GAU_1252 | GAU_1251 | Hypothetical protein. | Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.728 |
GAU_1252 | trxA | GAU_1252 | GAU_1250 | Hypothetical protein. | Thioredoxin; Belongs to the thioredoxin family. | 0.544 |
GAU_1253 | GAU_1252 | GAU_1253 | GAU_1252 | Hypothetical membrane protein. | Hypothetical protein. | 0.910 |
GAU_1253 | GAU_1254 | GAU_1253 | GAU_1254 | Hypothetical membrane protein. | Hypothetical protein. | 0.776 |
GAU_1253 | GAU_1255 | GAU_1253 | GAU_1255 | Hypothetical membrane protein. | Hypothetical protein. | 0.944 |
GAU_1253 | rsmI | GAU_1253 | GAU_1251 | Hypothetical membrane protein. | Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.633 |
GAU_1253 | trxA | GAU_1253 | GAU_1250 | Hypothetical membrane protein. | Thioredoxin; Belongs to the thioredoxin family. | 0.482 |
GAU_1254 | GAU_0940 | GAU_1254 | GAU_0940 | Hypothetical protein. | Hypothetical protein. | 0.402 |
GAU_1254 | GAU_1252 | GAU_1254 | GAU_1252 | Hypothetical protein. | Hypothetical protein. | 0.671 |
GAU_1254 | GAU_1253 | GAU_1254 | GAU_1253 | Hypothetical protein. | Hypothetical membrane protein. | 0.776 |
GAU_1254 | GAU_1255 | GAU_1254 | GAU_1255 | Hypothetical protein. | Hypothetical protein. | 0.773 |
GAU_1254 | GAU_2212 | GAU_1254 | GAU_2212 | Hypothetical protein. | Hypothetical protein. | 0.421 |
GAU_1254 | rsmI | GAU_1254 | GAU_1251 | Hypothetical protein. | Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.642 |
GAU_1254 | trxA | GAU_1254 | GAU_1250 | Hypothetical protein. | Thioredoxin; Belongs to the thioredoxin family. | 0.487 |
GAU_1255 | GAU_1252 | GAU_1255 | GAU_1252 | Hypothetical protein. | Hypothetical protein. | 0.923 |
GAU_1255 | GAU_1253 | GAU_1255 | GAU_1253 | Hypothetical protein. | Hypothetical membrane protein. | 0.944 |
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