STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosYPutative nitrous oxide reductase accessory protein NosY. (285 aa)    
Predicted Functional Partners:
nosL
Putative nitrous oxidase accessory protein NosL.
 
 
 0.991
nosD
Putative nitrous oxidase accessory protein NosD.
 
 
 0.990
nosF
Putative nitrous oxide reductase accessory protein NosF.
 
 
 0.977
nosZ
Putative nitrous oxide reductase.
 
 
 0.977
GAU_1384
Hypothetical membrane protein.
 
 
 0.970
GAU_1387
Hypothetical membrane protein.
 
     0.689
GAU_0368
Hypothetical protein.
  
     0.644
GAU_1379
Blue-copper protein.
       0.596
GAU_0191
Hypothetical protein.
  
     0.552
GAU_2074
Rrf2 family DNA binding protein.
  
     0.519
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.