STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_1446Hypothetical membrane protein. (195 aa)    
Predicted Functional Partners:
GAU_1445
Hypothetical protein.
 
     0.783
GAU_3831
Hypothetical protein.
  
     0.605
asnS
asparaginyl-tRNA synthetase; Protein synonym: AsnRS; protein synonym: asparagine--tRNA ligase.
       0.538
GAU_2350
Hypothetical protein.
  
     0.532
GAU_2726
Hypothetical protein.
  
     0.474
GAU_2452
Hypothetical protein.
  
     0.463
GAU_0561
Hypothetical protein.
  
     0.460
GAU_2651
Hypothetical protein.
  
     0.454
GAU_0728
Hypothetical protein.
  
     0.453
GAU_2059
Hypothetical protein.
  
     0.450
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.