STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (562 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase; Protein synonym: histidase.
 
 0.999
hutI
Imidazolonepropionase; Protein synonym: imidazolone-5-propionate hydrolase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 0.998
GAU_1935
Hypothetical protein.
       0.773
GAU_1036
Hypothetical protein.
  
  
 0.629
GAU_2666
Hypothetical protein.
  
  
 0.629
GAU_0971
Hypothetical protein.
  
  
 0.592
GAU_1035
Hypothetical protein.
  
  
 0.592
GAU_1042
Hypothetical protein.
  
  
 0.592
GAU_1079
Hypothetical protein.
  
  
 0.592
GAU_1744
Putative hydrolase.
  
  
 0.592
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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