STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_2000Beta-lactamase family protein. (389 aa)    
Predicted Functional Partners:
GAU_1999
Hypothetical protein.
    0.985
GAU_0691
Hypothetical protein.
    0.975
GAU_2675
Hypothetical protein.
    0.975
GAU_0693
Hypothetical protein.
    0.974
GAU_1046
beta-N-acetylhexosaminidase; Protein synonym: beta-N-acetylglucosaminidase.
  
 0.963
GAU_0937
Glycosidase.
  
 0.954
GAU_2003
Putative sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.854
GAU_2978
Beta-lactamase family protein.
  
     0.750
murQ
Hypothetical protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
    0.689
GAU_3334
Beta-lactamase family protein.
  
     0.647
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.