STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmFmethylmalonyl-CoA mutase family protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1132 aa)    
Predicted Functional Partners:
GAU_1708
Putative isobutyryl-CoA mutase small subunit.
 
0.997
GAU_1457
Putative isobutyryl-CoA mutase large subunit.
 
 
0.968
GAU_1710
Putative transport system kinase.
 
  
0.901
GAU_2755
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; Bifunctional protein.
 
  
 0.759
fadJ
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase; Bifunctional protein.
  
  
 0.693
fum
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.642
GAU_2381
Putative 2-oxoglutarate ferredoxin-oxidoreductase alpha subunit.
  
  
 0.617
paaZ
Phenylacetic acid degradation protein.
  
  
 0.596
GAU_1249
Hypothetical protein.
 
   
 0.559
GAU_0558
Methylenetetrahydrofolate reductase family protein.
     
 0.554
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.