STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_2128Putative sodium/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (510 aa)    
Predicted Functional Partners:
GAU_2129
Hypothetical membrane protein.
       0.777
GAU_2853
Putative proline dehydrogenase.
 
  
 0.734
acsA
Putative acetoacetyl-CoA synthetase.
  
  
 0.630
cstA
Carbon starvation protein A.
 
    0.571
GAU_2130
Hypothetical protein.
       0.564
GAU_2127
Hypothetical protein.
       0.527
GAU_3201
Putative amino acid ABC transporter permease/substrate binding protein; Bifunctional protein.
  
 
 0.467
GAU_0394
Putative sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.463
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.444
GAU_1154
Hypothetical membrane protein.
 
    0.413
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.