Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GAU_0196 | GAU_0293 | Hypothetical protein. | Hypothetical protein. | 0.723 |
GAU_0196 | GAU_0755 | Hypothetical protein. | Hypothetical protein. | 0.756 |
GAU_0196 | GAU_0777 | Hypothetical protein. | Hypothetical protein. | 0.762 |
GAU_0196 | GAU_1719 | Hypothetical protein. | Hypothetical protein. | 0.605 |
GAU_0196 | GAU_2042 | Hypothetical protein. | Hypothetical protein. | 0.764 |
GAU_0196 | GAU_2079 | Hypothetical protein. | Putative outer membrane protein. | 0.596 |
GAU_0196 | GAU_2469 | Hypothetical protein. | Hypothetical protein. | 0.759 |
GAU_0196 | GAU_2470 | Hypothetical protein. | Putative outer membrane protein. | 0.682 |
GAU_0196 | GAU_2497 | Hypothetical protein. | Hypothetical protein. | 0.680 |
GAU_0196 | GAU_3799 | Hypothetical protein. | Hypothetical membrane protein. | 0.748 |
GAU_0293 | GAU_0196 | Hypothetical protein. | Hypothetical protein. | 0.723 |
GAU_0293 | GAU_0755 | Hypothetical protein. | Hypothetical protein. | 0.767 |
GAU_0293 | GAU_0777 | Hypothetical protein. | Hypothetical protein. | 0.771 |
GAU_0293 | GAU_1719 | Hypothetical protein. | Hypothetical protein. | 0.584 |
GAU_0293 | GAU_2042 | Hypothetical protein. | Hypothetical protein. | 0.773 |
GAU_0293 | GAU_2079 | Hypothetical protein. | Putative outer membrane protein. | 0.676 |
GAU_0293 | GAU_2469 | Hypothetical protein. | Hypothetical protein. | 0.767 |
GAU_0293 | GAU_2470 | Hypothetical protein. | Putative outer membrane protein. | 0.713 |
GAU_0293 | GAU_2497 | Hypothetical protein. | Hypothetical protein. | 0.718 |
GAU_0293 | GAU_3799 | Hypothetical protein. | Hypothetical membrane protein. | 0.768 |
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