STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_2837Hypothetical protein. (201 aa)    
Predicted Functional Partners:
ctaC
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.930
GAU_2838
Hypothetical protein.
 
   
 0.893
GAU_2836
Fur family transcriptional regulator; Belongs to the Fur family.
       0.778
GAU_2037
Cytochrome c3.
    
 0.710
GAU_3580
Thioredoxin.
 
 
 0.702
GAU_2141
Thioredoxin.
 
 
 0.688
GAU_2580
Cytochrome oxidase assembly family protein.
 
 
 0.643
GAU_2171
Hypothetical protein.
  
 
 0.578
GAU_2835
Hypothetical membrane protein.
       0.554
fixN/fixO
Cytochrome c oxidase cbb3-type subunit I/mono-heme subunit; Bifunctional protein; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.551
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.