Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GAU_0131 | GAU_1078 | Putative oxidoreductase. | Hypothetical protein. | 0.748 |
GAU_0131 | GAU_1085 | Putative oxidoreductase. | Hypothetical protein. | 0.775 |
GAU_0131 | GAU_2997 | Putative oxidoreductase. | Putative outer membrane protein. | 0.710 |
GAU_0131 | GAU_2998 | Putative oxidoreductase. | Putative outer membrane protein. | 0.734 |
GAU_0131 | GAU_3292 | Putative oxidoreductase. | Hypothetical protein. | 0.401 |
GAU_0131 | GAU_3331 | Putative oxidoreductase. | Hypothetical protein. | 0.556 |
GAU_1078 | GAU_0131 | Hypothetical protein. | Putative oxidoreductase. | 0.748 |
GAU_1078 | GAU_1085 | Hypothetical protein. | Hypothetical protein. | 0.765 |
GAU_1078 | GAU_2997 | Hypothetical protein. | Putative outer membrane protein. | 0.733 |
GAU_1078 | GAU_2998 | Hypothetical protein. | Putative outer membrane protein. | 0.755 |
GAU_1078 | GAU_3292 | Hypothetical protein. | Hypothetical protein. | 0.657 |
GAU_1085 | GAU_0131 | Hypothetical protein. | Putative oxidoreductase. | 0.775 |
GAU_1085 | GAU_1078 | Hypothetical protein. | Hypothetical protein. | 0.765 |
GAU_1085 | GAU_2997 | Hypothetical protein. | Putative outer membrane protein. | 0.691 |
GAU_1085 | GAU_2998 | Hypothetical protein. | Putative outer membrane protein. | 0.711 |
GAU_1085 | GAU_3198 | Hypothetical protein. | Putative outer membrane protein. | 0.425 |
GAU_1085 | GAU_3292 | Hypothetical protein. | Hypothetical protein. | 0.412 |
GAU_1085 | GAU_3331 | Hypothetical protein. | Hypothetical protein. | 0.417 |
GAU_1085 | GAU_3789 | Hypothetical protein. | Putative anti-sigma factor. | 0.450 |
GAU_2946 | GAU_2952 | Putative outer membrane protein. | Putative outer membrane protein. | 0.785 |
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