STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_3010Putative hydrolase. (320 aa)    
Predicted Functional Partners:
pip
Proline iminopeptidase; Protein synonym: PAP; protein synonym: PIP; protein synonym: prolyl aminopeptidase; Belongs to the peptidase S33 family.
  
  
 
0.928
GAU_0538
Putative hydrolase.
  
  
 
0.925
GAU_2853
Putative proline dehydrogenase.
     
  0.900
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.900
GAU_3011
Hypothetical protein.
       0.764
GAU_0777
Hypothetical protein.
  
     0.569
GAU_3009
Hypothetical protein.
       0.536
GAU_0755
Hypothetical protein.
  
 
   0.508
GAU_3799
Hypothetical membrane protein.
 
     0.471
GAU_0293
Hypothetical protein.
  
     0.455
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.