Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU_3022 | GAU_3023 | GAU_3022 | GAU_3023 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Hypothetical protein. | 0.594 |
GAU_3022 | GAU_3024 | GAU_3022 | GAU_3024 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Putative M23B family peptidase. | 0.594 |
GAU_3022 | GAU_3025 | GAU_3022 | GAU_3025 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Hypothetical protein. | 0.404 |
GAU_3023 | GAU_3022 | GAU_3023 | GAU_3022 | Hypothetical protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.594 |
GAU_3023 | GAU_3024 | GAU_3023 | GAU_3024 | Hypothetical protein. | Putative M23B family peptidase. | 0.778 |
GAU_3023 | GAU_3025 | GAU_3023 | GAU_3025 | Hypothetical protein. | Hypothetical protein. | 0.509 |
GAU_3024 | GAU_3022 | GAU_3024 | GAU_3022 | Putative M23B family peptidase. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.594 |
GAU_3024 | GAU_3023 | GAU_3024 | GAU_3023 | Putative M23B family peptidase. | Hypothetical protein. | 0.778 |
GAU_3024 | GAU_3025 | GAU_3024 | GAU_3025 | Putative M23B family peptidase. | Hypothetical protein. | 0.509 |
GAU_3025 | GAU_3022 | GAU_3025 | GAU_3022 | Hypothetical protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.404 |
GAU_3025 | GAU_3023 | GAU_3025 | GAU_3023 | Hypothetical protein. | Hypothetical protein. | 0.509 |
GAU_3025 | GAU_3024 | GAU_3025 | GAU_3024 | Hypothetical protein. | Putative M23B family peptidase. | 0.509 |
GAU_3025 | GAU_3026 | GAU_3025 | GAU_3026 | Hypothetical protein. | Putative transcriptional regulator. | 0.503 |
GAU_3025 | GAU_3030 | GAU_3025 | GAU_3030 | Hypothetical protein. | Putative iron-sulfur cluster assembly protein. | 0.401 |
GAU_3025 | sufB | GAU_3025 | GAU_3027 | Hypothetical protein. | Putative iron-sulfur cluster assembly protein SufB. | 0.503 |
GAU_3025 | sufC | GAU_3025 | GAU_3028 | Hypothetical protein. | Putative iron-sulfur cluster assembly ATPase SufC. | 0.401 |
GAU_3025 | sufD | GAU_3025 | GAU_3029 | Hypothetical protein. | Putative iron-sulfur cluster assembly protein SufD. | 0.401 |
GAU_3026 | GAU_3025 | GAU_3026 | GAU_3025 | Putative transcriptional regulator. | Hypothetical protein. | 0.503 |
GAU_3026 | GAU_3030 | GAU_3026 | GAU_3030 | Putative transcriptional regulator. | Putative iron-sulfur cluster assembly protein. | 0.644 |
GAU_3026 | sufB | GAU_3026 | GAU_3027 | Putative transcriptional regulator. | Putative iron-sulfur cluster assembly protein SufB. | 0.820 |
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