STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adh-3NADP-dependent alcohol dehydrogenase. (353 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
 0.907
GAU_2061
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.907
GAU_3007
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.907
GAU_3382
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.907
adh
NADP-dependent alcohol dehydrogenase.
  
  
 
0.903
GAU_3287
Putative lipase.
     
  0.900
fixN/fixO
Cytochrome c oxidase cbb3-type subunit I/mono-heme subunit; Bifunctional protein; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.587
GAU_3117
Hypothetical protein.
       0.568
GAU_2900
Alcohol dehydrogenase.
  
 
 
0.417
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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