STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_3153Hypothetical protein; Belongs to the glutamate synthase family. (524 aa)    
Predicted Functional Partners:
gltD
Glutamate synthase small subunit; Protein synonym: GLTS beta chain; protein synonym: glutamate synthase subunit beta.
 
 
 0.997
gltB
Protein synonym: GLTS alpha chain; protein synonym: glutamate synthase alpha subunit.
 
 
0.977
GAU_1293
Leucine dehydrogenase; Protein synonym: LeuDH; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.807
gdhA
Glutamate dehydrogenase; Protein synonym: GDH; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.807
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.516
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.461
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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