STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_3274MarR family transcriptional regulator. (180 aa)    
Predicted Functional Partners:
GAU_3273
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    0.984
GAU_3275
Putative beta-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     0.970
GAU_3276
2-amninobenzoyl-CoA monooxygenase/reductase; Bifunctional protein.
 
  
 0.951
GAU_3269
Putative aerobic 2-aminobenzoate metabolism related protein.
 
     0.946
GAU_3271
Putative 2-aminobenzoate-CoA ligase.
 
     0.946
GAU_3270
Thioesterase.
 
     0.945
GAU_3272
acyl-CoA dehydrogenase.
 
    0.941
GAU_3268
Hypothetical protein.
       0.723
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
 
     0.698
GAU_0168
MarR family transcriptional regulator.
  
     0.673
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.