STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_3399Putative serine/threonine protein kinase. (856 aa)    
Predicted Functional Partners:
GAU_3833
Putative phosphoprotein phosphatase.
  
   0.795
GAU_0938
Putative serine/threonine protein phosphatase.
  
   0.791
GAU_2173
Putative serine/threonine protein phosphatase.
  
   0.785
GAU_3005
Putative serine/threonine protein phosphatase.
  
   0.783
GAU_3398
Hypothetical membrane protein.
       0.773
GAU_3400
Hypothetical protein.
       0.773
GAU_2968
Sigma factor, ECF-like family protein.
  
 
   0.751
GAU_3000
Sigma factor, ECF-like family protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
   0.751
GAU_1197
Sigma factor, ECF-like family protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
   0.749
GAU_0069
Sigma factor, ECF-like family protein.
  
 
   0.747
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.